PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AA4G00157
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Aethionemeae; Aethionema
Family CAMTA
Protein Properties Length: 1115aa    MW: 124879 Da    PI: 5.7294
Description CAMTA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AA4G00157genomeVEGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CG-1176.82.7e-55191612118
       CG-1   2 lke.kkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvgg....................... 77 
                l+e ++rwl++ ei++iL n++k+++++e+++rp+sgsl+L++rk++ryfrkDG++w+kkkdgktv+E+hekLKv+                        
  AA4G00157  19 LSEaQNRWLRPAEICEILRNHQKFHIASEPPNRPPSGSLFLFDRKVLRYFRKDGHNWRKKKDGKTVKEAHEKLKVNVfnnlsalifsaepcdgcesyclv 118
                45559***********************************************************************999********************* PP

       CG-1  78 ..vevlycyYahseenptfqrrcywlLeeelekivlvhylevk 118
                  ++vl+cyYah+e+n++fqrrcyw+Le++l +iv+vhylevk
  AA4G00157 119 gsIDVLHCYYAHGEDNENFQRRCYWMLEQDLMHIVFVHYLEVK 161
                ****************************************985 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5143780.79415166IPR005559CG-1 DNA-binding domain
SMARTSM010766.1E-7618161IPR005559CG-1 DNA-binding domain
PfamPF038591.8E-3021101IPR005559CG-1 DNA-binding domain
PfamPF038592.1E-14118160IPR005559CG-1 DNA-binding domain
Gene3DG3DSA:2.60.40.106.7E-4459564IPR013783Immunoglobulin-like fold
PfamPF018334.5E-4486560IPR002909IPT domain
SuperFamilySSF812961.14E-14486572IPR014756Immunoglobulin E-set
PROSITE profilePS5029714.371670816IPR020683Ankyrin repeat-containing domain
SuperFamilySSF484034.75E-14671735IPR020683Ankyrin repeat-containing domain
Gene3DG3DSA:1.25.40.201.5E-13674735IPR020683Ankyrin repeat-containing domain
CDDcd002042.93E-9682814No hitNo description
PROSITE profilePS500889.351687719IPR002110Ankyrin repeat
Gene3DG3DSA:1.25.40.201.5E-13771817IPR020683Ankyrin repeat-containing domain
SuperFamilySSF484034.75E-14771816IPR020683Ankyrin repeat-containing domain
SuperFamilySSF525406.11E-8925978IPR027417P-loop containing nucleoside triphosphate hydrolase
SMARTSM000151.1928950IPR000048IQ motif, EF-hand binding site
PROSITE profilePS500967.95929958IPR000048IQ motif, EF-hand binding site
PfamPF006120.0022930949IPR000048IQ motif, EF-hand binding site
SMARTSM000150.0092951973IPR000048IQ motif, EF-hand binding site
PROSITE profilePS500969.304952976IPR000048IQ motif, EF-hand binding site
PfamPF006124.9E-4954973IPR000048IQ motif, EF-hand binding site
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009409Biological Processresponse to cold
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0071275Biological Processcellular response to aluminum ion
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0005515Molecular Functionprotein binding
Sequence ? help Back to Top
Protein Sequence    Length: 1115 aa     Download sequence    Send to blast
MADRGSFGFA PRLDIGQLLS EAQNRWLRPA EICEILRNHQ KFHIASEPPN RPPSGSLFLF  60
DRKVLRYFRK DGHNWRKKKD GKTVKEAHEK LKVNVFNNLS ALIFSAEPCD GCESYCLVGS  120
IDVLHCYYAH GEDNENFQRR CYWMLEQDLM HIVFVHYLEV KGNRMSAGGI KENNSNSLSG  180
NTSANYSTAT PSSILSPSCE DADSGDSHQA SSTLQAFPEP QIGASLLKHQ QNAGLMNSFD  240
TTSVWGNRDG WTSAIGMGDV SQAHGNRVRE SDSQRSVDVP AWDAAFDNSL TRYQNLPCND  300
PLTQIQPSSA GWMPMEGNTE KGSLLMAENL QNPLQNQLNW QIPVQNSLPL QKWPIDSLSR  360
MTDGTDLDNF EAFSGFLGSQ NQQPVGGNFQ TPNMEAVYIP KLDPEDPQYE ANTSQMLPLR  420
KSLLKKEDSL KKVDSFTRWV SKELGEMEDL QMQSSSGGIA WTSVECETAA AGSSLSPSLS  480
KDQRFTIIDF WPKWTQTDSD VEVMVIGTFL MSSQEVTSYN WSCMFGEVEV PADILVDGVL  540
CCHAPPHEAG QVPFYITCSD RFASSEVREF DFLPGSTKKL NTADIYGSST IELSLHLRLE  600
NLLTHRAVVH EHHIFEDIVE KRKKISKLML LKDEKDCLLP PVTTGKDSTE QEVKERLIRE  660
EFEDKLYLWL IHKVTEEGKG PNILDEEGQG VLHLAAALGY DWAIKPILAA GVSINFRDAN  720
GWSALHWAGF SGRQESQIYL PSISYDFGSS SLLFILTKIL KLNLVILKFQ TVAVLVSLGA  780
DAGALTDPSP EVPLGRTAAD LAYEYGHRGI SGFLAESSLT SYLEKLTVDT KETSSIDSFG  840
TKAVKTVAER TATPMSYGDV PERLSMKDSL DAVCNATQAA DRLHQVFRMQ SFQRKQLSEL  900
GDNGFDISDE LALSFAAAKT KKPGRNEGAH AAAVQIQKKY RGWKKRKEFL LIRQRIVKIQ  960
AHVRGHQVRK QYRAIIWSVG LLEKIILRWR RKGSGLRGFK RDTVPKPAEP VCPAPQEDDY  1020
DFLKDGRKQT EERLQKALTR VKSMVQYPEA RAQYRRLLTV VEGFRENEAS SSAMNNSNNN  1080
NSNNNTEEAG NYNDDDLIDI DSLLDDDTFM AVTFE
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00043PBMTransfer from AT5G64220Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_002864887.10.0calmodulin-binding protein
SwissprotQ6NPP40.0CMTA2_ARATH; Calmodulin-binding transcription activator 2
TrEMBLD7MR880.0D7MR88_ARALL; Calmodulin-binding protein
STRINGscaffold_803130.10.0(Arabidopsis lyrata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM40822452
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G64220.20.0Calmodulin-binding transcription activator protein with CG-1 and Ankyrin domains